Function reference • driver

Basic Compositional Data Analysis Functions Functions for Basic CoDA manipulation of matricies.
`miniclo()`	Closure operator
`glr()` `glrInv()` `create_alr_base()` `alr()` `alrInv()` `create_default_ilr_base()` `ilr()` `ilrInv()` `create_clr_base()` `clr()` `clrInv()`	Log-Ratio Transformation
`ilrvar2phi()` `ilrvar2ilrvar()` `ilrvar2clrvar()` `clrvar2ilrvar()` `clrvar2varmat()` `ilrvar2varmat()` `alrvar2clrvar()` `clrvar2alrvar()` `alrvar2alrvar()` `alrvar2ilrvar()` `ilrvar2alrvar()` `alrvar2varmat()`	Convert CoDA covariance matricies between representations
`eu2logfoldchange()`	Calculate Equilvalent Log Fold Change for Given Change in Evidence Information
Array Compositional Data Analysis Functions Functions for manipulating Arrays using CoDA Transforms
`miniclo_array()`	Closure Operation applied to array on margin
`glr_array()` `glrInv_array()` `alr_array()` `alrInv_array()` `ilr_array()` `ilrInv_array()` `clr_array()` `clrInv_array()`	Log-Ratios Transforms for Arrays
Tidy Handling of Arrays Functions for converting arrays between tidy and wide formats
`gather_array()`	Gather Multidimensional Array to Tidy Tibble
`spread_array()`	Spread data.frame
Quick Transforms and Functions for Preparing data for modeling
`Logit()`	Logit Transformation of Vector
`invLogit()`	Inverse Logit Transformation of Vector
`center()`	Center matrix (subtract row mean from each row)
`onehot()`	One Hot Encoding of vector
Tidy Bayesian Functions
`summarise_posterior()`	Shortcut for summarize variable with quantiles and mean
Probability Distributions
`rUnifSphere()` `rUnifSimplex()`	Sample Uniformily from various objects centered at the origin
Other Assorted Functions
`add_array_dim()`	Add 1 dimension to array
`split_along_dim()`	Split Multidimeninal array to a list along a specified dimension
`bdiag()`	Create Block Diagonal Matrix from Passed Matricies
`any_cases_array()` `all_cases_array()`	Test for any/all non-NA along margin
`dmode()`	Mode of a vector x
`lower_triangle_factors()`	Vector to lower diagonal of matrix formed from factor by factor
`vec_to_mat()`	Check if Vector and if so, Convert to Row Matrix
`array_apply_1D_function()`	Apply Function to 1 dimension of array along all others

Reference

Basic Compositional Data Analysis Functions

Array Compositional Data Analysis Functions

Tidy Handling of Arrays

Quick Transforms and Functions for Preparing data for modeling

Tidy Bayesian Functions

Probability Distributions

Other Assorted Functions

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