fido Bayesian multinomial logistic normal models, really fast. Lots of models including linear and non-linear regression, time-series analysis, and joint modeling of multi-omic data. renamed from stray. GitHub

RcppHungarian Header library and R functions to solve minimum cost bipartite matching problem using Huhn-Munkres algorithm. CRAN

RcppCoDA Blazing fast library for the analysis of compositional data with both C++ and R interfaces GitHub

philr Phylogenetic partitioning based ILR transform for metagenomics data. Bioconductor

driver Justin’s Personal Utilities for R. GitHub

NVC C++ implemetation with R bindings to quickly solve normal variance component weighting problem GitHub

TeacupCerberus Bayesian Estimation of Covariation Between and Within Two Multivariate Count Datasets GitHub